logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000417_2|CGC3

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000417_00214
hypothetical protein
CAZyme 82922 83743 - GT2
MGYG000000417_00215
Phosphoglycolate phosphatase
null 83795 85294 - HAD_2| Rce1-like
MGYG000000417_00216
Transcription elongation factor GreA
null 85297 85800 - GreA_GreB_N| GreA_GreB
MGYG000000417_00217
Phospho-N-acetylmuramoyl-pentapeptide-transferase
TC 85837 86922 - 9.B.146.1.3
MGYG000000417_00218
hypothetical protein
STP 86953 88671 - SBP_bac_1
MGYG000000417_00219
L-arabinose transport system permease protein AraQ
TC 88742 89614 - 3.A.1.1.29
MGYG000000417_00220
putative multiple-sugar transport system permease YteP
TC 89614 90561 - 3.A.1.1.10
MGYG000000417_00221
HTH-type transcriptional activator RhaR
TF 90858 91817 + HTH_AraC+HTH_AraC
MGYG000000417_00222
Beta-galactosidase
CAZyme 91830 95300 - GH2
MGYG000000417_00223
Xylan alpha-(1->2)-glucuronosidase
CAZyme 95352 97346 - GH67
MGYG000000417_00224
Peptide chain release factor 3
null 97376 100153 - GTP_EFTU| EFG_IV| EFG_C| NYN_YacP
MGYG000000417_00225
Thiamine transporter ThiT
TC 100425 100970 + 2.A.88.3.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by dbCAN-PUL is xylan download this fig


Genomic location